BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034F06LP1|AL429928
(853 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1578 0.0
>3x_Contig1800
Length = 38778
Score = 1578 bits (790), Expect = 0.0
Identities = 832/853 (97%)
Strand = Plus / Plus
Query: 1 atcctgtagcagtngtgacatccgttgagtaggttgaaaagtcggcaccagtccatggag 60
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2287 atcctgtagcagtagtgacatccgtagagtaggttgaaaagtcggcaccagtccatggag 2346
Query: 61 tgaatttagtactagcggtcttaaactctggggtctcgacgtggtaaatggtcttgacgg 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2347 taaatttagtactagcggtcttaaactctggggtctcgacgtggtaaatggtcttgacgg 2406
Query: 121 tttcaacgccatccgcaccagtagttgtggacaactcagtggcaawagtcgaggtaatag 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2407 tttcaacgccatccgcaccagtagttgtggacaactcagtggcaatagtcgaggtaatag 2466
Query: 181 taccggtccatggggtaaagactgtggtcttttggtcaacttctggagtttcaacatggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2467 taccggtccatggggtaaagactgtggtcttttggtcaacttctggagtttcaacatggt 2526
Query: 241 aaatggtcttcacggtttcgataccgtcagcaccagttgtggtagtaacgtcagtggcga 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 2527 aaatggtcttcacggtttcgataccgtcagcaccagtagtggtagtaacgtcagtagcga 2586
Query: 301 atgtkgacgtaatggtaccggtccatggagtgaaaacagtggtcttttggtcaacttctg 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2587 atgttgacgtaatggtaccggtccatggagtgaaaacagtggtcttttggtcaacttctg 2646
Query: 361 gagtttcaacatggtaaatggkcttcacggttttaataccatctttgccggkagtggkag 420
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 2647 gagtttcaacatggtaaatggtcttcacggttttaataccatctttgccggtagtggtag 2706
Query: 421 tgacgtcagttgcgaatgttgacgtaatggtaccagtccatggagtgaaaacagtggtct 480
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2707 taacgtcagtagcgaatgttgacgtaatggtaccagtccatggagtgaaaacagtggtct 2766
Query: 481 tttggtcgacttctggagtgtcgacatggtagatggkcttcacagttggaacaccatcgg 540
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 2767 tttggtcgacttctggagtttcgacatggtagatggtcttcacagttggaacaccatcgg 2826
Query: 541 caccagtggkagtagtcaaatcagtggcaatagtgacggtactgacaccggtccatggag 600
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2827 caccagtggtagtagtcaaatcagtggcaatagtaacggtactgacaccggtccatggag 2886
Query: 601 tgaagacggtggtagcagtttgaacttcgggggtctcaacaacaacaaggtttccaggtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2887 tgaagacggtggtagcagtttgaacttcgggggtctcaacaacaacaaggtttccaggtg 2946
Query: 661 aagtacctccattttggcctgtaattgtggttaaagtagtgaatgtagttgttactgtwc 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2947 aagtacctccattttggcctgtaattgtggttaaagtagtgaatgtagttgttactgtac 3006
Query: 721 cagtccatggtaaagttgttgtaacgacaggaacaggacatggttgaccatctkggatac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3007 cagtccatggtaaagttgttgtaacgacaggaacaggacatggttgaccatctgggatac 3066
Query: 781 tgtagatatagccgtcgaatgtwctatggagaacgccatctggatccttgaaagacactg 840
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 3067 tgtagatatagccgtcgaatgtactatggagaacgccatcaggatccttgaaagacactg 3126
Query: 841 ttaggccagctgg 853
| |||||||||||
Sbjct: 3127 taaggccagctgg 3139
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4542
Number of Sequences: 1807
Number of extensions: 4542
Number of successful extensions: 127
Number of sequences better than 1.0e-20: 1
length of query: 853
length of database: 10,358,551
effective HSP length: 16
effective length of query: 837
effective length of database: 10,329,639
effective search space: 8645907843
effective search space used: 8645907843
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)